STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102982230THO complex subunit 7 homolog. (205 aa)    
Predicted Functional Partners:
THOC1
THO complex subunit 1.
    
 0.996
THOC3
THO complex subunit 3 isoform X1.
   
 0.979
THOC5
THO complex subunit 5 homolog.
   
 0.977
THOC6
THO complex subunit 6 homolog isoform X1.
    
 0.974
THOC2
THO complex subunit 2 isoform X6.
   
 0.972
THOC7
THO complex subunit 7 homolog isoform X2.
  
  
 
0.900
DDX39B
Spliceosome RNA helicase DDX39B.
   
 0.837
CHTOP
Chromatin target of PRMT1 protein isoform X1.
    
 0.757
DDX39A
ATP-dependent RNA helicase DDX39A isoform X2.
   
 0.757
ZC3H13
Zinc finger CCCH domain-containing protein 13 isoform X2.
   
 0.749
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.