STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR2Cadherin-related family member 2 isoform X2. (1311 aa)    
Predicted Functional Partners:
CDHR5
Cadherin-related family member 5.
   
 0.863
PCDH15
Protocadherin-15 isoform X4.
   
0.774
USH1C
Harmonin isoform X2.
   
 
 0.757
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
      
 0.714
GPRIN1
G protein-regulated inducer of neurite outgrowth 1.
    
 0.647
JUP
Junction plakoglobin.
    
 0.619
CTNNB1
Catenin beta-1.
    
 0.619
TSPAN1
Tetraspanin.
     
 0.601
AFDN
Afadin isoform X14.
   
 
 0.549
MPP5
MAGUK p55 subfamily member 5 isoform X1; Belongs to the MAGUK family.
    
 0.539
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.