STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFDP1Transcription factor Dp-1 isoform X2. (457 aa)    
Predicted Functional Partners:
E2F4
Transcription factor E2F4.
   
 0.993
E2F1
Transcription factor E2F1 isoform X2.
   
 0.993
RB1
Retinoblastoma-associated protein isoform X2.
   
 0.992
RBL1
Retinoblastoma-like protein 1 isoform X4.
   
 0.990
E2F6
Transcription factor E2F6.
  
 0.988
RBL2
Retinoblastoma-like protein 2.
   
 0.987
E2F3
Transcription factor E2F3 isoform X1.
   
 0.980
GTF2H1
General transcription factor IIH subunit 1 isoform X1.
    
 
 0.979
ENSPCTP00005020790
annotation not available
  
 0.975
E2F2
Transcription factor E2F2.
   
 0.974
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.