STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF4Transcription factor 4 isoform X1. (677 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
   
 0.973
TAL1
T-cell acute lymphocytic leukemia protein 1.
   
 0.895
MYOD1
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
   
 0.820
MYF5
Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.
   
 0.771
ASCL2
Achaete-scute homolog 2.
   
 0.755
ASCL1
Achaete-scute homolog 1.
   
 0.755
MYOG
Myogenin.
   
 0.750
LMO2
Rhombotin-2.
    
 0.746
ASCL4
Achaete-scute homolog 4.
   
 0.713
RUNX1T1
Protein CBFA2T1 isoform X1.
   
 
 0.698
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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