STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM248Transmembrane protein 248 isoform X2. (1050 aa)    
Predicted Functional Partners:
RABEP1
Rab GTPase-binding effector protein 1 isoform X1.
   
 0.998
RABEP2
Rab GTPase-binding effector protein 2 isoform X3.
   
 0.998
RAB21
Ras-related protein Rab-21.
   
 0.990
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.981
RAB24
Ras-related protein Rab-24 isoform X2.
   
 0.958
RAB17
Ras-related protein Rab-17.
   
 0.946
UBA52
ubiquitin-60S ribosomal protein L40.
    
 0.941
ENSPCTP00005026766
annotation not available
    
 0.941
RAB22A
Ras-related protein Rab-22A isoform X2.
   
 0.932
RAB5C
Ras-related protein Rab-5C.
   
 0.929
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.