STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIP1L1pre-mRNA 3'-end-processing factor FIP1 isoform X4. (594 aa)    
Predicted Functional Partners:
WDR33
pre-mRNA 3' end processing protein WDR33 isoform X1.
   
 0.999
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
CPSF1
Cleavage and polyadenylation specificity factor subunit 1 isoform X3.
   
 0.998
CPSF3
Cleavage and polyadenylation specificity factor subunit 3 isoform X1.
    
 0.998
SYMPK
Symplekin isoform X1.
   
 0.997
CPSF4
Cleavage and polyadenylation specificity factor subunit 4 isoform X2.
    
 0.997
CPSF4L
Putative cleavage and polyadenylation specificity factor subunit 4-like protein.
    
 0.996
CSTF3
Cleavage stimulation factor subunit 3 isoform X1.
   
 0.996
RBBP6
E3 ubiquitin-protein ligase RBBP6 isoform X1.
    
 
 0.958
WDR77
Methylosome protein 50 isoform X1.
   
 0.953
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.