STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCTP00005009734annotation not available (141 aa)    
Predicted Functional Partners:
MRPL17
39S ribosomal protein L17, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.796
DAP3
28S ribosomal protein S29, mitochondrial.
    
   0.794
ERAL1
GTPase Era, mitochondrial isoform X1.
  
  
 0.779
MRPL21
39S ribosomal protein L21, mitochondrial isoform X2.
  
 
 0.772
LOC112062948
Superoxide dismutase [Mn], mitochondrial-like.
   
 
 0.761
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.761
MRPL47
39S ribosomal protein L47, mitochondrial.
    
   0.728
MRPL46
39S ribosomal protein L46, mitochondrial isoform X1.
    
   0.728
MRPL43
39S ribosomal protein L43, mitochondrial.
    
   0.728
TSTD1
Thiosulfate:glutathione sulfurtransferase isoform X1.
   
   0.690
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.