STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX17Transcription factor SOX-17. (407 aa)    
Predicted Functional Partners:
LEF1
Lymphoid enhancer-binding factor 1 isoform X1.
    
0.962
TCF7L1
Transcription factor 7-like 1.
    
0.958
TCF7L2
Transcription factor 7-like 2 isoform X4.
    
0.957
TCF7
Transcription factor 7 isoform X3.
    
0.955
GATA6
Transcription factor GATA-6.
   
 0.901
PAX6
Paired box protein Pax-6 isoform X1.
   
 
 0.804
MIXL1
Homeobox protein MIXL1 isoform X1.
   
 
 0.803
EOMES
Eomesodermin homolog isoform X1.
    
 0.783
ENSPCTP00005019401
annotation not available
  
 
 0.775
BMP4
Bone morphogenetic protein 4.
    
 0.774
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.