STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM19Transmembrane protein 19 isoform X1. (358 aa)    
Predicted Functional Partners:
RUNDC3A
RUN domain-containing protein 3A isoform X6.
      
 0.774
LIPN
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
      
 0.762
LOC102976238
Proproteinase E; Belongs to the peptidase S1 family.
      
 0.567
GATD3A
Glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial isoform X4.
      
 0.542
LOC114485129
Collagen alpha-1(XVI) chain-like.
      
 0.517
SDHC
Succinate dehydrogenase cytochrome b560 subunit, mitochondrial.
      
 0.509
SLC9A7
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.508
TTC39C
Tetratricopeptide repeat protein 39C isoform X1.
      
 0.508
ZDHHC6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.443
ENSPCTP00005030944
annotation not available
      
 0.443
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.