STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCTP00005011338annotation not available (193 aa)    
Predicted Functional Partners:
ENSPCTP00005009911
annotation not available
   
 0.971
ENSPCTP00005011082
annotation not available
   
 0.971
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.971
RPL8
60S ribosomal protein L8.
  
 0.946
RPL32
60S ribosomal protein L32.
  
 0.942
RPLP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.933
RPL27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.933
RPL7
60S ribosomal protein L7 isoform X2.
  
 0.914
RPS27A
ubiquitin-40S ribosomal protein S27a.
   
 0.913
RPS16
40S ribosomal protein S16 isoform X1.
  
 0.900
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.