HLA-DOA protein (Physeter catodon) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

HLA-DOA

HLA class II histocompatibility antigen, DO alpha chain; Belongs to the MHC class II family. (250 aa)

Predicted Functional Partners:

HLA-DOB

0.989

LOC102994322

0.980

LOC102994605

0.976

CD74

0.976

LOC102976012

0.933

ENSPCTP00005029882

0.862

ENSPCTP00005011215

0.773

RPS14

0.773

ENSPCTP00005020849

0.712

LOC102976287

0.703

Your Current Organism:

Physeter catodon

NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD74	ENSPCTP00005029882	ENSPCTP00005023746	ENSPCTP00005029882	HLA class II histocompatibility antigen gamma chain isoform X2.	annotation not available	0.899
CD74	HLA-DOA	ENSPCTP00005023746	ENSPCTP00005013037	HLA class II histocompatibility antigen gamma chain isoform X2.	HLA class II histocompatibility antigen, DO alpha chain; Belongs to the MHC class II family.	0.976
CD74	HLA-DOB	ENSPCTP00005023746	ENSPCTP00005029969	HLA class II histocompatibility antigen gamma chain isoform X2.	HLA class II histocompatibility antigen, DO beta chain-like.	0.989
CD74	LOC102976012	ENSPCTP00005023746	ENSPCTP00005006844	HLA class II histocompatibility antigen gamma chain isoform X2.	HLA class II histocompatibility antigen, DQ beta 1 chain isoform X2.	0.988
CD74	LOC102976287	ENSPCTP00005023746	ENSPCTP00005006942	HLA class II histocompatibility antigen gamma chain isoform X2.	HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X1; Belongs to the MHC class II family.	0.977
CD74	LOC102994322	ENSPCTP00005023746	ENSPCTP00005022944	HLA class II histocompatibility antigen gamma chain isoform X2.	HLA class II histocompatibility antigen, DM alpha chain isoform X1; Belongs to the MHC class II family.	0.984
CD74	LOC102994605	ENSPCTP00005023746	ENSPCTP00005012682	HLA class II histocompatibility antigen gamma chain isoform X2.	HLA class II histocompatibility antigen, DM beta chain.	0.975
ENSPCTP00005011215	ENSPCTP00005029882	ENSPCTP00005011215	ENSPCTP00005029882	annotation not available	annotation not available	0.701
ENSPCTP00005011215	HLA-DOA	ENSPCTP00005011215	ENSPCTP00005013037	annotation not available	HLA class II histocompatibility antigen, DO alpha chain; Belongs to the MHC class II family.	0.773
ENSPCTP00005011215	HLA-DOB	ENSPCTP00005011215	ENSPCTP00005029969	annotation not available	HLA class II histocompatibility antigen, DO beta chain-like.	0.701
ENSPCTP00005011215	LOC102976012	ENSPCTP00005011215	ENSPCTP00005006844	annotation not available	HLA class II histocompatibility antigen, DQ beta 1 chain isoform X2.	0.701
ENSPCTP00005011215	LOC102976287	ENSPCTP00005011215	ENSPCTP00005006942	annotation not available	HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X1; Belongs to the MHC class II family.	0.788
ENSPCTP00005011215	LOC102994322	ENSPCTP00005011215	ENSPCTP00005022944	annotation not available	HLA class II histocompatibility antigen, DM alpha chain isoform X1; Belongs to the MHC class II family.	0.560
ENSPCTP00005011215	LOC102994605	ENSPCTP00005011215	ENSPCTP00005012682	annotation not available	HLA class II histocompatibility antigen, DM beta chain.	0.540
ENSPCTP00005020849	ENSPCTP00005029882	ENSPCTP00005020849	ENSPCTP00005029882	annotation not available	annotation not available	0.647
ENSPCTP00005020849	HLA-DOA	ENSPCTP00005020849	ENSPCTP00005013037	annotation not available	HLA class II histocompatibility antigen, DO alpha chain; Belongs to the MHC class II family.	0.712
ENSPCTP00005020849	HLA-DOB	ENSPCTP00005020849	ENSPCTP00005029969	annotation not available	HLA class II histocompatibility antigen, DO beta chain-like.	0.621
ENSPCTP00005020849	LOC102976012	ENSPCTP00005020849	ENSPCTP00005006844	annotation not available	HLA class II histocompatibility antigen, DQ beta 1 chain isoform X2.	0.615
ENSPCTP00005020849	LOC102976287	ENSPCTP00005020849	ENSPCTP00005006942	annotation not available	HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X1; Belongs to the MHC class II family.	0.782
ENSPCTP00005029882	CD74	ENSPCTP00005029882	ENSPCTP00005023746	annotation not available	HLA class II histocompatibility antigen gamma chain isoform X2.	0.899