STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCLYSelenocysteine lyase isoform X5. (445 aa)    
Predicted Functional Partners:
ISCU
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
 0.972
SEPHS2
Selenide, water dikinase 2.
    
 0.957
SEPHS1
Selenide, water dikinase 1.
    
 0.948
TXNRD2
Thioredoxin reductase 2, mitochondrial.
  
 0.933
TXNRD1
Thioredoxin reductase 1, cytoplasmic isoform X3.
  
 0.920
LOC112063128
Uncharacterized protein LOC112063128.
     
 
0.900
LOC112063024
Uncharacterized protein LOC112063024.
     
 
0.900
NFU1
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X1.
  
 0.820
EFHB
EF-hand domain-containing family member B.
      
 0.747
LYRM4
LYR motif-containing protein 4 isoform X1; Belongs to the complex I LYR family.
   
 0.746
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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