STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5piggyBac transposable element-derived protein 5. (520 aa)    
Predicted Functional Partners:
CD3E
T-cell surface glycoprotein CD3 epsilon chain.
   
 0.818
PGBD1
piggyBac transposable element-derived protein 1 isoform X1.
    
 
 0.794
THAP9
DNA transposase THAP9 isoform X1.
    
 
 0.793
XKR7
XK-related protein.
      
 0.744
GIN1
Gypsy retrotransposon integrase-like protein 1.
   
 
 0.715
GALNT2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.697
SAMD11
Sterile alpha motif domain-containing protein 11 isoform X1.
    
 
 0.689
CD3G
T-cell surface glycoprotein CD3 gamma chain.
   
 0.685
CD247
T-cell surface glycoprotein CD3 zeta chain.
   
 0.667
TMEM145
Transmembrane protein 145 isoform X7.
   
  
 0.651
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.