STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A16Solute carrier family 22 member 16 isoform X1. (577 aa)    
Predicted Functional Partners:
SLC23A1
Solute carrier family 23 member 1 isoform X1.
   
  
 0.707
SLC38A11
Putative sodium-coupled neutral amino acid transporter 11.
   
  
 0.661
SLC28A3
Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.
   
  
 0.638
SLC44A4
Choline transporter-like protein 4 isoform X1; Belongs to the CTL (choline transporter-like) family.
   
  
 0.619
SLC44A3
Choline transporter-like protein 3; Belongs to the CTL (choline transporter-like) family.
   
  
 0.618
RPS27A
ubiquitin-40S ribosomal protein S27a.
   
 
 0.602
SLC13A5
Solute carrier family 13 member 5 isoform X2.
   
  
 0.547
SLC22A18
Solute carrier family 22 member 18.
   
  
 0.545
SLC36A2
Proton-coupled amino acid transporter 2.
   
  
 0.539
CPNE2
Copine-2 isoform X1.
      
 0.527
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.