STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCTP00005014648annotation not available (250 aa)    
Predicted Functional Partners:
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.918
NCBP1
Nuclear cap-binding protein subunit 1 isoform X1.
   
 0.872
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 0.870
SRSF5
Serine/arginine-rich splicing factor 5 isoform X1.
   
 0.870
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.861
SRSF7
Serine/arginine-rich splicing factor 7 isoform X1.
   
 0.857
PAPOLG
poly(A) polymerase gamma isoform X1.
   
 0.835
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.830
DHX38
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1.
    
 0.801
ACIN1
Apoptotic chromatin condensation inducer in the nucleus isoform X1.
   
 0.782
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.