STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNRC1Proline-rich nuclear receptor coactivator 1. (329 aa)    
Predicted Functional Partners:
DCP1A
mRNA-decapping enzyme 1A isoform X1.
    
 0.729
LOC114484299
mRNA-decapping enzyme 1A-like.
    
 0.729
LOC114485313
Kelch-like protein 24.
   
  
 0.663
PM20D2
Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family.
 
    
 0.546
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
      
 0.532
UBE2E1
Ubiquitin-conjugating enzyme E2 E1.
      
 0.523
ENSPCTP00005008560
annotation not available
      
 0.523
UBE3D
E3 ubiquitin-protein ligase E3D isoform X10.
      
 0.509
ZFP36L1
mRNA decay activator protein ZFP36L1.
   
  
 0.454
TRIM6
Tripartite motif-containing protein 6 isoform X2.
      
 0.454
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.