STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCTP00005017488LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein H-like. (185 aa)    
Predicted Functional Partners:
LOC102976411
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein H3-like.
 
 
 0.793
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X7.
   
 0.592
HNRNPU
Heterogeneous nuclear ribonucleoprotein U isoform X3.
   
 0.587
PNN
Pinin.
   
    0.585
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.575
SRSF11
Serine/arginine-rich splicing factor 11 isoform X4.
   
 0.572
SRSF1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 0.544
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.532
SLTM
SAFB-like transcription modulator isoform X1.
   
    0.528
HNRNPL
Heterogeneous nuclear ribonucleoprotein L isoform X2.
   
 0.516
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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