STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCTP00005017820LIM domain only 3. (164 aa)    
Predicted Functional Partners:
LDB1
LIM domain-binding protein 1 isoform X1.
    
 0.838
LDB2
LIM domain-binding protein 2 isoform X1.
    
 0.777
ENSPCTP00005028205
LIM domain-binding protein 2-like.
    
 0.777
TAL1
T-cell acute lymphocytic leukemia protein 1.
    
 0.768
GATA6
Transcription factor GATA-6.
    
 0.670
GATA1
Erythroid transcription factor isoform X1.
    
 0.561
TCF3
Transcription factor E2-alpha isoform X6.
    
 0.548
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.538
TAL2
T-cell acute lymphocytic leukemia protein 2 isoform X2.
    
 0.530
GATA2
Endothelial transcription factor GATA-2.
    
 0.528
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.