STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114484824EF-hand domain-containing protein D1-like isoform X2. (141 aa)    
Predicted Functional Partners:
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.535
NMRAL1
nmrA-like family domain-containing protein 1.
    
 
 0.485
EFHD1
EF-hand domain-containing protein D1.
 
      0.475
ERMN
Ermin isoform X2.
    
 
 0.449
TMEM98
Transmembrane protein 98 isoform X1.
      
 0.435
PEX11G
Peroxisomal membrane protein 11C isoform X2.
      
 0.435
PQLC3
PQ-loop repeat-containing protein 3 isoform X2.
      
 0.435
TRIM67
Tripartite motif-containing protein 67 isoform X1.
      
 0.432
SUGT1
Protein SGT1 homolog.
   
  
 0.413
LY6D
Lymphocyte antigen 6D.
      
 0.412
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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