STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOCTNocturnin isoform X1. (393 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X5.
   
 0.843
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.839
CNOT2
CCR4-NOT transcription complex subunit 2 isoform X1.
    
 0.828
CNOT3
CCR4-NOT transcription complex subunit 3 isoform X2.
    
 0.827
CNOT4
CCR4-NOT transcription complex subunit 4 isoform X1.
    
 0.821
DDX6
Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
    
 0.745
CNOT8
CCR4-NOT transcription complex subunit 8 isoform X1.
    
 0.732
PARN
poly(A)-specific ribonuclease PARN isoform X2.
      
 0.702
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.697
ENSPCTP00005023496
annotation not available
    
 0.697
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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