STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPM6ANeuronal membrane glycoprotein M6-a isoform X4. (278 aa)    
Predicted Functional Partners:
UPK1B
Tetraspanin.
   
  
 0.665
ANKRD10
Ankyrin repeat domain-containing protein 10 isoform X1.
      
 0.645
LOC102980579
Schwannomin-interacting protein 1 isoform X1.
   
  
 0.617
CDKL3
Cyclin-dependent kinase-like 3.
      
 0.546
RTN4
Reticulon.
   
 
 0.537
PRR15
Proline-rich protein 15.
      
 0.534
PMS1
PMS1 protein homolog 1 isoform X1.
      
 0.513
CEP19
Centrosomal protein of 19 kDa.
      
 0.512
CENPV
Centromere protein V.
      
 0.508
MBP
Myelin basic protein isoform X6.
   
 
 0.506
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.