STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH12Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)    
Predicted Functional Partners:
RDH8
Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.967
LRAT
Lecithin retinol acyltransferase isoform X1.
     
 0.954
CYP26A1
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
   
 
 0.950
AWAT2
LOW QUALITY PROTEIN: acyl-CoA wax alcohol acyltransferase 2.
   
 
 0.944
RDH10
Retinol dehydrogenase 10.
   
 
 0.944
LOC102973133
All-trans-retinol 13,14-reductase isoform X2.
  
 
 0.935
DGAT1
O-acyltransferase.
   
 
 0.934
ALDH1A3
Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family.
  
 0.933
LOC102984442
Retinol dehydrogenase 16-like isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.932
ALDH1A1
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
  
 0.928
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.