STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REM1GTP-binding protein; Belongs to the small GTPase superfamily. RGK family. (300 aa)    
Predicted Functional Partners:
FRMPD2
FERM and PDZ domain-containing protein 2.
    
 0.902
ENSPCTP00005027245
Intersectin-2-like isoform X1.
   
 0.825
ITSN2
Intersectin-2 isoform X1.
   
 0.825
SNTA1
Alpha-1-syntrophin isoform X2.
      
 0.765
RHO
Rhodopsin.
    
 0.723
ITSN1
Intersectin-1.
    
 0.707
MET
Hepatocyte growth factor receptor.
   
 0.664
SHANK3
SH3 and multiple ankyrin repeat domains protein 3.
   
 0.608
RALGDS
Ral guanine nucleotide dissociation stimulator isoform X5.
    
 0.603
MST1R
Macrophage-stimulating protein receptor.
   
 0.598
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.