STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPARGC1BPeroxisome proliferator-activated receptor gamma coactivator 1-beta. (946 aa)    
Predicted Functional Partners:
SREBF1
Sterol regulatory element-binding protein 1 isoform X1.
    
 0.935
ESRRA
Steroid hormone receptor ERR1 isoform X1.
    
 0.793
NCBP1
Nuclear cap-binding protein subunit 1 isoform X1.
    
   0.762
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.748
NRF1
Nuclear respiratory factor 1 isoform X1.
     
 0.719
PPARA
Peroxisome proliferator-activated receptor alpha isoform X1.
    
 0.524
PPARD
Peroxisome proliferator-activated receptor delta.
    
 0.523
ESRRG
Estrogen-related receptor gamma isoform X2.
    
 0.516
LOC102979313
Steroid hormone receptor ERR2 isoform X1.
    
 0.516
ENSPCTP00005000423
annotation not available
    
 
 0.493
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.