STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10298278440S ribosomal protein S27. (82 aa)    
Predicted Functional Partners:
ENSPCTP00005009911
annotation not available
   
 0.968
ENSPCTP00005011082
annotation not available
   
 0.968
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.968
RPS27A
ubiquitin-40S ribosomal protein S27a.
   
 0.876
RPS9
40S ribosomal protein S9 isoform X1; Belongs to the universal ribosomal protein uS4 family.
   
 0.870
RPS16
40S ribosomal protein S16 isoform X1.
   
 0.869
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.869
RPS10
40S ribosomal protein S10.
   
 0.868
RPL27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.817
IMP3
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.807
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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