STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TANGO6Transport and Golgi organization protein 6 homolog isoform X1. (1095 aa)    
Predicted Functional Partners:
PLEKHM3
Pleckstrin homology domain-containing family M member 3 isoform X1.
      
 0.508
SAAL1
Protein SAAL1 isoform X1.
      
 0.495
SLC7A6OS
Probable RNA polymerase II nuclear localization protein SLC7A6OS isoform X2.
    
 
 0.454
GPN2
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 
 0.449
MCF2L2
Probable guanine nucleotide exchange factor MCF2L2.
      
 0.443
TWISTNB
DNA-directed RNA polymerase I subunit RPA43 isoform X1.
      
 0.437
TTI2
TELO2-interacting protein 2.
      
 0.431
PLPPR4
Phospholipid phosphatase-related protein type 4 isoform X1.
      
 0.429
MCTP2
Multiple C2 and transmembrane domain-containing protein 2.
      
 0.429
ZER1
Protein zer-1 homolog isoform X1.
      
 0.414
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.