STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114485200Transmembrane protease serine 6-like; Belongs to the peptidase S1 family. (530 aa)    
Predicted Functional Partners:
LOC102991591
Transmembrane protease serine 6.
 
      0.861
DCN
Decorin; May affect the rate of fibrils formation.
    
 0.801
HJV
Hemojuvelin isoform X1.
    
 
 0.707
TFR2
Transferrin receptor protein 2.
   
  
 0.576
CD109
CD109 antigen isoform X1.
    
 0.554
MET
Hepatocyte growth factor receptor.
    
 0.532
MST1R
Macrophage-stimulating protein receptor.
    
 0.532
HGFAC
Hepatocyte growth factor activator isoform X1.
  
0.526
HFE
Hereditary hemochromatosis protein isoform X1; Belongs to the MHC class I family.
      
 0.517
INSYN2A
Inhibitory synaptic factor 2A.
      
 0.508
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.