STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM149B1Protein FAM149B1 isoform X1. (607 aa)    
Predicted Functional Partners:
TBC1D32
Protein broad-minded.
    
 
 0.644
GM2A
Ganglioside GM2 activator.
    
 0.601
HAL
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
    0.581
CFAP20
Cilia- and flagella-associated protein 20.
    
 
 0.534
NEU1
Sialidase-1 isoform X1.
  
 
 0.528
DNAJC9
dnaJ homolog subfamily C member 9.
   
  
 0.430
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase; Hydrolyzes the N-glycolyl group from N-glycolylglucosamine 6- phosphate (GlcNGc-6-P) in the N-glycolylneuraminic acid (Neu5Gc) degradation pathway.
    
 0.426
OVGP1
Oviduct-specific glycoprotein isoform X1; Belongs to the glycosyl hydrolase 18 family.
    
 0.423
CHIA
Acidic mammalian chitinase; Belongs to the glycosyl hydrolase 18 family.
    
 0.423
LOC102990773
LOW QUALITY PROTEIN: acidic mammalian chitinase-like; Belongs to the glycosyl hydrolase 18 family.
    
 0.423
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.