STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSBP1Heat shock factor-binding protein 1. (120 aa)    
Predicted Functional Partners:
HSF1
Heat shock factor protein 1 isoform X1.
    
 0.630
ENSPCTP00005016806
annotation not available
    
 0.630
ENSPCTP00005002829
annotation not available
    
 
 0.562
ENSPCTP00005013951
annotation not available
    
 
 0.562
WASHC3
WASH complex subunit 3 isoform X1.
    
 
 0.562
STOML2
Stomatin-like protein 2, mitochondrial.
      
 0.512
SMS
Spermine synthase.
      
 0.510
HSF2
Heat shock factor protein 2 isoform X1.
    
 0.504
LAMTOR1
Ragulator complex protein LAMTOR1.
   
  
 0.486
STK38L
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.455
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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