STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYLC2LOW QUALITY PROTEIN: cylicin-2. (466 aa)    
Predicted Functional Partners:
CCIN
Calicin.
   
 
 0.947
UNC79
Protein unc-79 homolog.
    
 0.734
PLCZ1
Phosphoinositide phospholipase C.
      
 0.666
SPATA6
Spermatogenesis-associated protein 6 isoform X2.
      
 0.619
LOC112067310
Cation channel sperm-associated protein subunit gamma-like.
      
 0.595
LOC102973195
Cation channel sperm-associated protein subunit gamma.
      
 0.595
ARMC3
Armadillo repeat-containing protein 3 isoform X1.
    
 
 0.566
HIP1
Huntingtin-interacting protein 1.
    
 0.537
ENSPCTP00005014367
annotation not available
      
 0.518
CBY2
Chibby family member 2.
      
 0.507
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.