STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSPNSarcospan. (243 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan isoform X1.
     
 0.851
SGCG
Gamma-sarcoglycan isoform X1.
   
 0.829
SGCD
Delta-sarcoglycan.
   
 0.823
UTRN
Utrophin isoform X4.
     
 0.802
SGCA
Alpha-sarcoglycan isoform X3.
   
 
 0.799
DMD
Dystrophin isoform X2.
      
 0.751
SGCE
Epsilon-sarcoglycan isoform X3.
   
 
 0.697
SNTB1
Beta-1-syntrophin.
      
 0.640
DRP2
Dystrophin-related protein 2.
      
 0.635
SGCZ
Zeta-sarcoglycan.
   
 0.594
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.