STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DOBHLA class II histocompatibility antigen, DO beta chain-like. (262 aa)    
Predicted Functional Partners:
HLA-DOA
HLA class II histocompatibility antigen, DO alpha chain; Belongs to the MHC class II family.
   
0.989
CD74
HLA class II histocompatibility antigen gamma chain isoform X2.
   
 0.989
LOC102994322
HLA class II histocompatibility antigen, DM alpha chain isoform X1; Belongs to the MHC class II family.
   
 0.976
HLA-DRA
HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.
   
0.972
LOC102976287
HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X1; Belongs to the MHC class II family.
   
0.938
LOC102994605
HLA class II histocompatibility antigen, DM beta chain.
   
0.936
ENSPCTP00005011497
annotation not available
   
  0.846
ENSPCTP00005011215
annotation not available
   
 0.701
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.701
INS
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
    
 
 0.667
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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