STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTKN2Rhotekin-2 isoform X2. (589 aa)    
Predicted Functional Partners:
RHOC
Rho-related GTP-binding protein RhoC.
    
 0.715
RHOA
Ras homolog gene family, member A.
    
 0.715
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.715
RND3
Rho-related GTP-binding protein RhoE.
    
 0.553
RND1
Rho-related GTP-binding protein Rho6.
    
 0.553
URI1
Unconventional prefoldin RPB5 interactor 1 isoform X1.
      
 0.536
RHOF
Rho-related GTP-binding protein RhoF.
    
 0.522
TMEM47
Transmembrane protein 47.
      
 0.518
PSME3
Proteasome activator complex subunit 3.
      
 0.509
ENSPCTP00005007913
annotation not available
    
 0.456
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.