STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM1Shroom family member 1. (841 aa)    
Predicted Functional Partners:
TEX15
Testis expressed 15, meiosis and synapsis associated.
      
 0.521
VSIG10L
Uncharacterized protein.
      
 0.502
RTL9
Retrotransposon Gag like 9.
  
     0.499
FAAP24
FA core complex associated protein 24.
      
 0.496
TDRD6
Tudor domain containing 6.
      
 0.489
DLEC1
Uncharacterized protein.
      
 0.465
ITGAL
Integrin subunit alpha L; Belongs to the integrin alpha chain family.
      
 0.457
SOWAHA
Sosondowah ankyrin repeat domain family member A.
      
 0.443
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
  
     0.437
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.