STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3SL15_LOXAFUncharacterized protein. (3019 aa)    
Predicted Functional Partners:
AKAP9
PACT_coil_coil domain-containing protein.
 
     0.916
KCNQ1
Ion_trans domain-containing protein; Belongs to the potassium channel family.
    
 0.657
PLK1
Serine/threonine-protein kinase PLK.
   
 0.632
IFT88
Intraflagellar transport 88.
   
 0.542
CENPJ
Centromere protein J.
   
 0.542
RAB11A
RAB11A, member RAS oncogene family.
   
 0.525
RAB11B
RAB11B, member RAS oncogene family.
   
 0.525
DYNC1LI1
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 0.520
PCM1
Pericentriolar material 1.
   
 0.512
CETN1
Centrin 1.
    
 0.509
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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