close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF17TNF receptor superfamily member 17. (185 aa)    
Predicted Functional Partners:
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
 0.972
MZB1
Marginal zone B and B1 cell specific protein.
   
  
 0.955
TNFSF13
TNF superfamily member 13; Belongs to the tumor necrosis factor family.
    
 0.722
TNFRSF13B
TACI-CRD2 domain-containing protein.
   
  
 0.687
POU2AF1
POU class 2 homeobox associating factor 1.
   
  
 0.600
JCHAIN
Joining chain of multimeric IgA and IgM.
   
  
 0.594
TNFRSF13C
TNF receptor superfamily member 13C.
      
 0.582
CD40LG
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
      
 0.526
G3U8U8_LOXAF
Ig-like domain-containing protein.
    
   0.428
G3UDC7_LOXAF
Ig-like domain-containing protein.
    
   0.428
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.