STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN10UBX domain protein 10. (281 aa)    
Predicted Functional Partners:
UBXN2A
UBX domain protein 2A.
    
 
 0.962
UBXN6
UBX domain protein 6.
    
 
 0.962
IFT74
Intraflagellar transport 74.
    
 0.953
TTC26
Tetratricopeptide repeat domain 26.
    
 0.952
IFT88
Intraflagellar transport 88.
    
 0.951
NSFL1C
NSFL1 cofactor.
    
 
 0.949
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.941
ASPSCR1
TUG-UBL1 domain-containing protein.
    
 
 0.938
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.930
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 
 0.930
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.