STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC1ELKS/RAB6-interacting/CAST family member 1. (1074 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.826
G3UF18_LOXAF
C2 domain-containing protein.
    
 
 0.826
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 
 0.742
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 
 0.711
PHLDB2
Pleckstrin homology like domain family B member 2.
      
 0.706
PPFIA3
PTPRF interacting protein alpha 3.
    
 
 0.678
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.556
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.527
ZFPL1
Zinc finger protein like 1.
      
 0.525
ADSL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.523
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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