STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM4SF4Transmembrane 4 L six family member 4. (202 aa)    
Predicted Functional Partners:
SLC6A1
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
 
 0.843
TM4SF20
Transmembrane 4 L six family member 20.
   
  
 0.801
ABHD15
Abhydrolase domain containing 15.
      
 0.692
ASGR1
Asialoglycoprotein receptor 1.
   
  
 0.602
LGALS2
Galectin.
   
  
 0.510
GULP1
GULP PTB domain containing engulfment adaptor 1.
      
 0.497
PLLP
Plasmolipin.
   
  
 0.496
ERC2
Uncharacterized protein.
      
 0.485
G3UEY1_LOXAF
Uncharacterized protein.
      
 0.485
FFAR4
Free fatty acid receptor 4.
   
  
 0.479
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.