STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL5LHFPL tetraspan subfamily member 5. (219 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
   
 0.914
TMC1
Transmembrane channel-like protein.
   
 0.862
CIB2
Calcium and integrin binding family member 2.
     
 0.855
GGT7
Gamma-glutamyltransferase 7.
   
   0.817
TMIE
Transmembrane inner ear.
     
 0.794
GCLC
Glutamate-cysteine ligase catalytic subunit.
      
 0.753
TULP1
Tubby-like protein; Belongs to the TUB family.
   
  
 0.708
CDHR5
Cadherin related family member 5.
   
 0.707
TMC2
Transmembrane channel-like protein.
     
 0.686
TGM7
Transglutaminase 7.
   
  
 0.656
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.