STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT1CCR4-NOT transcription complex subunit 1. (2378 aa)    
Predicted Functional Partners:
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.999
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 0.999
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 0.999
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.998
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 0.998
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 0.998
CNOT7
CCR4-NOT transcription complex subunit 7.
   
 0.990
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 0.986
CNOT8
CCR4-NOT transcription complex subunit 8.
   
 0.980
CNOT6L
CCR4-NOT transcription complex subunit 6 like.
   
 0.980
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.