Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRPK1SRSF protein kinase 1. (649 aa)    
Predicted Functional Partners:
SRSF5
Serine and arginine rich splicing factor 5.
    
 0.930
SRSF6
Serine and arginine rich splicing factor 6.
    
 0.919
SRSF4
Serine and arginine rich splicing factor 4.
    
 0.919
SRSF1
Uncharacterized protein.
    
 0.919
SRSF2
RRM domain-containing protein.
   
 0.889
SRSF9
Serine and arginine rich splicing factor 9.
    
 0.887
SRSF3
Serine and arginine rich splicing factor 3.
    
 0.865
G3UC69_LOXAF
RRM domain-containing protein.
    
 0.865
SRSF7
Serine and arginine rich splicing factor 7.
    
 0.803
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.650
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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