STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK1SRSF protein kinase 1. (649 aa)    
Predicted Functional Partners:
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.959
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.959
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.959
SRSF1
Uncharacterized protein.
    
 0.949
SRSF9
Serine and arginine rich splicing factor 9.
    
 0.944
SRSF2
RRM domain-containing protein.
    
 0.940
SRSF3
Serine and arginine rich splicing factor 3.
    
 0.922
SRSF7
Serine and arginine rich splicing factor 7.
    
 0.918
CDC5L
Cell division cycle 5 like.
    
   0.675
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.610
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.