STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A7Solute carrier family 38 member 7. (466 aa)    
Predicted Functional Partners:
COPS7A
COP9 signalosome subunit 7A.
      
 0.828
PNPO
Pyridoxamine 5'-phosphate oxidase.
      
 0.785
CARHSP1
Calcium regulated heat stable protein 1.
   
  
 0.692
TPCN2
Ion_trans domain-containing protein.
      
 0.626
SLC38A9
Solute carrier family 38 member 9.
    
 
 0.602
TPCN1
Two pore segment channel 1.
      
 0.593
TYW5
tRNA-yW synthesizing protein 5.
      
 0.589
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.530
YIPF3
Yip1 domain family member 3.
      
 0.494
SLC1A7
Amino acid transporter.
    
 
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.