STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOT2Aspartate aminotransferase. (411 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase.
   
 0.998
CS
Citrate synthase; Belongs to the citrate synthase family.
   
 0.990
GOT1
Aspartate aminotransferase.
   
  0.978
GLUD1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.975
FH
Fumarate hydratase.
   
 0.971
LDHB
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.964
GPT
Glutamic--pyruvic transaminase.
   
 0.958
GPT2
Glutamic--pyruvic transaminase 2.
   
 0.958
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
  0.957
MDH1
Malate dehydrogenase.
   
 0.953
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.