STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP4UTP4 small subunit processome component. (685 aa)    
Predicted Functional Partners:
UTP18
UTP18 small subunit processome component.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
HEATR1
U3snoRNP10 domain-containing protein.
   
 0.999
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 0.999
TBL3
Transducin beta like 3.
   
0.999
WDR43
WD repeat domain 43.
   
 0.999
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
PDCD11
Programmed cell death 11.
   
 0.999
WDR75
WD repeat domain 75.
   
 0.999
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.