Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASC3 | EIF4A3 | ENSLAFP00000000510 | ENSLAFP00000013100 | CASC3 exon junction complex subunit. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.999 |
CASC3 | G3T6Q3_LOXAF | ENSLAFP00000000510 | ENSLAFP00000009227 | CASC3 exon junction complex subunit. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.951 |
CASC3 | G3UN69_LOXAF | ENSLAFP00000000510 | ENSLAFP00000029278 | CASC3 exon junction complex subunit. | Uncharacterized protein. | 0.880 |
CASC3 | MAGOHB | ENSLAFP00000000510 | ENSLAFP00000001631 | CASC3 exon junction complex subunit. | Mago homolog B, exon junction complex subunit. | 0.987 |
CASC3 | PNN | ENSLAFP00000000510 | ENSLAFP00000007425 | CASC3 exon junction complex subunit. | Pinin, desmosome associated protein. | 0.843 |
CASC3 | RANBP2 | ENSLAFP00000000510 | ENSLAFP00000000630 | CASC3 exon junction complex subunit. | RAN binding protein 2. | 0.952 |
CASC3 | RBM8A | ENSLAFP00000000510 | ENSLAFP00000016803 | CASC3 exon junction complex subunit. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.994 |
CASC3 | UPF1 | ENSLAFP00000000510 | ENSLAFP00000023305 | CASC3 exon junction complex subunit. | UPF1 RNA helicase and ATPase. | 0.980 |
CASC3 | UPF3A | ENSLAFP00000000510 | ENSLAFP00000017421 | CASC3 exon junction complex subunit. | UPF3A regulator of nonsense mediated mRNA decay. | 0.914 |
CASC3 | UPF3B | ENSLAFP00000000510 | ENSLAFP00000001068 | CASC3 exon junction complex subunit. | UPF3B regulator of nonsense mediated mRNA decay. | 0.914 |
EIF4A3 | CASC3 | ENSLAFP00000013100 | ENSLAFP00000000510 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | CASC3 exon junction complex subunit. | 0.999 |
EIF4A3 | G3T6Q3_LOXAF | ENSLAFP00000013100 | ENSLAFP00000009227 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.959 |
EIF4A3 | G3UN69_LOXAF | ENSLAFP00000013100 | ENSLAFP00000029278 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.906 |
EIF4A3 | MAGOHB | ENSLAFP00000013100 | ENSLAFP00000001631 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Mago homolog B, exon junction complex subunit. | 0.998 |
EIF4A3 | PNN | ENSLAFP00000013100 | ENSLAFP00000007425 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | Pinin, desmosome associated protein. | 0.919 |
EIF4A3 | RANBP2 | ENSLAFP00000013100 | ENSLAFP00000000630 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | RAN binding protein 2. | 0.963 |
EIF4A3 | RBM8A | ENSLAFP00000013100 | ENSLAFP00000016803 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.995 |
EIF4A3 | UPF1 | ENSLAFP00000013100 | ENSLAFP00000023305 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UPF1 RNA helicase and ATPase. | 0.925 |
EIF4A3 | UPF3A | ENSLAFP00000013100 | ENSLAFP00000017421 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UPF3A regulator of nonsense mediated mRNA decay. | 0.947 |
EIF4A3 | UPF3B | ENSLAFP00000013100 | ENSLAFP00000001068 | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | UPF3B regulator of nonsense mediated mRNA decay. | 0.947 |
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