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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (266 aa)    
Predicted Functional Partners:
CAPN11
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
 
 
 0.922
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
 
 
 0.815
CAPN2
Calpain 2; Belongs to the peptidase C2 family.
   
0.782
CAPN5
Calpain 5; Belongs to the peptidase C2 family.
 
 
 0.735
CAST
Calpastatin.
   
 0.682
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
   
 0.680
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
    0.675
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
   
0.673
G3TGT3_LOXAF
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
0.673
CAPN1
Calpain 1; Belongs to the peptidase C2 family.
   
0.673
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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