STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRAC1Chromatin accessibility complex subunit 1. (131 aa)    
Predicted Functional Partners:
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.994
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.989
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.872
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.872
NFYB
Nuclear transcription factor Y subunit beta.
   
 0.766
G3TEP4_LOXAF
Uncharacterized protein.
   
 0.765
BAZ1B
Bromo domain-containing protein.
   
 0.765
RSF1
Remodeling and spacing factor 1.
     
 0.761
COA5
Cytochrome c oxidase assembly factor 5.
      
 0.761
NFYA
Nuclear transcription factor Y subunit alpha.
    
 0.755
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.