Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A13Solute carrier family 16 member 13. (426 aa)    
Predicted Functional Partners:
EMB
Uncharacterized protein.
   
 0.639
SLC25A45
Solute carrier family 25 member 45; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.575
G3T6Y0_LOXAF
Uncharacterized protein.
      
 0.573
G3TRF6_LOXAF
Uncharacterized protein.
      
 0.573
ERMP1
Endoplasmic reticulum metallopeptidase 1.
    
 
 0.565
BSG
Basigin (Ok blood group).
   
 0.520
SLC5A9
Solute carrier family 5 member 9; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.505
RBM11
RNA binding motif protein 11.
   
 
 0.504
LDHD
Lactate dehydrogenase D.
    
 
 0.470
DMTN
Dematin actin binding protein.
      
 0.455
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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