STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC146Coiled-coil domain containing 146. (908 aa)    
Predicted Functional Partners:
GMNN
Geminin DNA replication inhibitor.
    
   0.803
CABCOCO1
Uncharacterized protein.
      
 0.731
PHF13
PHD finger protein 13.
    
 0.686
CPLX4
Complexin 4.
      
 0.667
LRRC23
Leucine rich repeat containing 23.
   
 0.653
RSPH14
Uncharacterized protein.
   
  
 0.653
ZNF385A
Zinc finger protein 385A.
    
 0.639
SDR39U1
Short chain dehydrogenase/reductase family 39U member 1.
      
 0.635
TCTE1
T-complex-associated-testis-expressed 1.
    
 0.634
TSNAXIP1
Translin associated factor X interacting protein 1.
   
 0.630
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.