STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC146Coiled-coil domain containing 146. (908 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.795
CFAP52
Cilia and flagella associated protein 52.
   
 0.587
RSPH14
Uncharacterized protein.
      
 0.583
CFAP161
Cilia and flagella associated protein 161.
   
 0.580
TSNAXIP1
Translin associated factor X interacting protein 1.
   
 0.578
DLEC1
Uncharacterized protein.
    
 0.570
SAXO2
Stabilizer of axonemal microtubules 2.
   
 0.569
LRRC23
Leucine rich repeat containing 23.
   
 0.557
LRRC34
Leucine rich repeat containing 34.
      
 0.541
SPATA18
Spermatogenesis associated 18.
      
 0.534
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.